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[CF-metadata] No standard names for element concentrations in sediment?

From: Daniel Neumann <daniel.neumann>
Date: Fri, 18 May 2018 11:45:08 +0200

Hi,

Thanks for correction. I realized that I need a standard name not only
for silicate but for biogenic silica plus silicate. I updated the
proposed name and description as follows:

moles_of_silicon_per_unit_area_in_seabed_sediment

unit: mol/m2

description: moles_of_X_per_unit_area_in_Y describes the amount of X in
a column with unity base area of material/compartment Y. 'Seabed
sediment' means particulate matter bound at the sea floor including
interstitial pore water. Information on the location of the interface
between water column and sediment can be provided via the comment
attribute. 'Silicon' summarizes 'dissolved inorganic silicon' and
'biogenic silica'. 'Dissolved inorganic silicon' means the sum of all
inorganic silicon in solution (including silicic acid and its first
dissociated anion SiO(OH)3-). 'Biogenic silica' are biogenic silicon
minerals which originate from the siliceous skeletal material of dead
diatoms and other silica-utilizing organisms.


Daniel


On 18.05.2018 09:47, Lowry, Roy K. wrote:
>
> Hi (yet) again,
>
>
> Overnight I remembered a debate on CF about not using'dissolved
> inorganic silicon' rather than 'silicate' in new Standard Names. I
> also think it's worth some clarification in the definition to explain
> how things can be dissolved in something that many would think of as a
> solid.
>
>
> So that will give us:
>
>
> moles_of_nitrogen_per_unit_area_in_seabed_sediment
>
>
> unit: mol/m2
>
>
> description: moles_of_X_per_unit_area_in_Y describes the amount of X
> in a column with unity base area of material/compartment Y. 'Seabed
> sediment' means particulate matter bound at the sea floor including
> interstitial pore water. Information on the location of the interface
> between water column and sediment can be provided via the comment
> attribute.
>
>
>
> moles_of_dissolved_inorganic_silicon_per_unit_area_in_seabed_sediment
>
>
> unit: mol/m2
>
>
> description: moles_of_X_per_unit_area_in_Y describes the amount of X
> in a column with unity base area of material/compartment Y. 'Seabed
> sediment' means particulate matter bound at the sea floor including
> interstitial?pore water. Information on the location of the interface
> between water column and sediment can be provided via the comment
> attribute. 'Dissolved inorganic silicon' means the sum of all
> inorganic silicon in solution (including silicic acid and its first
> dissociated anion SiO(OH)3-).
>
>
> Cheers, Roy.
>
>
>
> I am retiring on 31/05/2018 but will continue to be active through an
> Emeritus Fellowship using this e-mail address.
>
>
>
> ------------------------------------------------------------------------
> *From:* CF-metadata <cf-metadata-bounces at cgd.ucar.edu> on behalf of
> Daniel Neumann <daniel.neumann at io-warnemuende.de>
> *Sent:* 17 May 2018 19:58
> *To:* cf-metadata at cgd.ucar.edu
> *Subject:* Re: [CF-metadata] No standard names for element
> concentrations in sediment?
>
> Great :-) . Then I would like to propose the following two new
> standard names:
>
>
>
> moles_of_nitrogen_per_unit_area_in_seabed_sediment
>
>
> unit: mol/m2
>
>
> description: moles_of_X_per_unit_area_in_Y describes the amount of X
> in a column with unity base area of material/compartment Y. 'Sediment'
> means particulate matter bound at the sea floor. Information on the
> location of the interface between water column and sediment can be
> provided via the comment attribute.
>
>
>
> and
>
>
>
> moles_of_silicate_expressed_as_silicon_per_unit_area_in_seabed_sediment
>
>
> unit: mol/m2
>
>
> description: moles_of_X_per_unit_area_in_Y describes the amount of X
> in a column with unity base area of material/compartment Y. 'Sediment'
> means particulate matter bound at the sea floor. Information on the
> location of the interface between water column and sediment can be
> provided via the comment attribute.
>
>
>
> Cheers,
>
> Daniel
>
>
>
> On 17.05.2018 16:00, Lowry, Roy K. wrote:
>>
>> Hi Daniel,
>>
>>
>> That works for me.
>>
>>
>> Cheers, Roy.
>>
>>
>>
>> I am retiring on 31/05/2018 but will continue to be active through an
>> Emeritus Fellowship using this e-mail address.
>>
>>
>>
>> ------------------------------------------------------------------------
>> *From:* CF-metadata <cf-metadata-bounces at cgd.ucar.edu>
>> <mailto:cf-metadata-bounces at cgd.ucar.edu> on behalf of Daniel Neumann
>> <daniel.neumann at io-warnemuende.de>
>> <mailto:daniel.neumann at io-warnemuende.de>
>> *Sent:* 17 May 2018 10:41
>> *To:* CF Metadata Mail List
>> *Subject:* Re: [CF-metadata] No standard names for element
>> concentrations in sediment?
>> Dear Roy, Dear Jonathan,
>>
>> Thank you for the feedback. I see? that sediment might be ambiguous.
>> Would "seabed sediment" or "marine seabed sediment" be an acceptable
>> alternative?
>>
>> ? moles_of_nitrogen_per_unit_area_in_seabed_sediment
>>
>> This would clarify that the sea floor is meant as location of the
>> sediment. It would also clarify that not bare rock is meant.
>>
>> Cheers,
>> Daniel
>>
>>
>> On 16.05.2018 11:42, Lowry, Roy K. wrote:
>>>
>>> Thanks Daniel,
>>>
>>> Couple of additional thoughts that struck me. Is there possibility
>>> of confusion between seafloor sediment and suspended sediment? What
>>> if the seabed was bare rock?? So, might:
>>>
>>> moles_of_nitrogen_per_unit_area_in_seabed
>>>
>>> be better?
>>>
>>> Let?s see if we get any other thoughts on the list.
>>>
>>> Cheers, Roy.
>>>
>>> *From:*CF-metadata <cf-metadata-bounces at cgd.ucar.edu>
>>> <mailto:cf-metadata-bounces at cgd.ucar.edu> *On Behalf Of *Daniel Neumann
>>> *Sent:* 16 May 2018 09:28
>>> *To:* CF Metadata Mail List <cf-metadata at cgd.ucar.edu>
>>> <mailto:cf-metadata at cgd.ucar.edu>
>>> *Subject:* Re: [CF-metadata] No standard names for element
>>> concentrations in sediment?
>>>
>>> Dear Roy,
>>>
>>> > I think benthos chemistry is virgin territory for CF - not really
>>> surprising for a standard that started in the atmosphere before
>>> dipping its toes in the ocean.
>>>
>>> :-)
>>>
>>> > I'm presuming your coming from a modelling perspective,
>>>
>>> Yes
>>>
>>> In our current model setup (ecosystem model of the water column) we
>>> have a fairly simple sediment and write out the nitrogen amount per m2.
>>>
>>> This name might be appropriate for this purpose:
>>> moles_of_nitrogen_per_unit_area_in_sediment
>>>
>>> unit:
>>> mol/m2
>>>
>>> description:
>>> moles_of_X_per_unit_area_in_Y describes the amount of X in a column
>>> with unity base area of material/compartment Y. 'Sediment' means
>>> particulate matter bound at the sea floor. Information on the
>>> location of the interface between water column and sediment can be
>>> provided via the comment attribute.
>>>
>>>
>>> Cheers,
>>> Daniel
>>>
>>>
>>> On 15.05.2018 18:30, Lowry, Roy K. wrote:
>>>
>>> Dear Daniel,
>>>
>>> I think benthos chemistry is virgin territory for CF - not
>>> really surprising for a standard that started in the atmosphere
>>> before dipping its toes in the ocean.
>>>
>>> Some thoughts based on my experience?with observed sediment
>>> chemistry data. The data may be reported? per unit mass of wet
>>> or dry sediment or?per unit volume of wet sediment. Also it is
>>> worth making clear that 'sediment' means sediment of all grain
>>> sizes (say a phrase like 'total_sediment')?as samples are
>>> frequently sieved prior to analysis.
>>>
>>> I'm presuming your coming from a modelling perspective, so I'm
>>> not totally clear about your needs, but would something like
>>> 'mole_concentration_of_nitrogen_in_wet_total_sediment' be what
>>> you would be looking for?
>>>
>>> Cheers, Roy.
>>>
>>> I am retiring on 31/05/2018 but will continue to be active
>>> through an Emeritus Fellowship using this e-mail address.
>>>
>>> ------------------------------------------------------------------------
>>>
>>> *From:*CF-metadata <cf-metadata-bounces at cgd.ucar.edu>
>>> <mailto:cf-metadata-bounces at cgd.ucar.edu> on behalf of Daniel
>>> Neumann <daniel.neumann at io-warnemuende.de>
>>> <mailto:daniel.neumann at io-warnemuende.de>
>>> *Sent:* 15 May 2018 16:51
>>> *To:* CF Metadata Mail List
>>> *Subject:* [CF-metadata] No standard names for element
>>> concentrations in sediment?
>>>
>>> Dear CF Mailing List,
>>>
>>> I am looking for standard names to describe the mole
>>> concentration of
>>> nitrogen in the sediment. The CF standard name table does not
>>> contain
>>> any standard names regarding "mole_concentration" in "sediment".
>>> I was
>>> wondering whether another term than "sediment" was used for such
>>> names.
>>> I also tried "mud", "seabed", and "sea_bed". Or do no such standard
>>> names exist at all?
>>>
>>> Cheers,
>>> Daniel
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>> subject to the Freedom of Information Act 2000 and the contents of
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>>
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> ------------------------------------------------------------------------
> This message (and any attachments) is for the recipient only. NERC is
> subject to the Freedom of Information Act 2000 and the contents of
> this email and any reply you make may be disclosed by NERC unless it
> is exempt from release under the Act. Any material supplied to NERC
> may be stored in an electronic records management system.
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-- 
Daniel Neumann
Leibniz Institute for Baltic Sea Research Warnemuende
Physical Oceanography and Instrumentation
Seestrasse 15
18119 Rostock
Germany
phone:  +49-381-5197-287
fax:    +49-381-5197-114 or 440
e-mail: daniel.neumann at io-warnemuende.de
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